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Imaris AI for Cell Counting and Morphology

Learn how to use the trainable AI pixel classifier to count and analyze morphology of cells in your microscopy images. Overcome typical problems, such as touching cells or cells touching the borders.

Learning Objectives

  • Get cell count, volume and morphologies
  • Advantages of AI Pixel classification over classical image segmentation methods
  • Split touching cells and exclude cells touching borders
  • Train an AI Surface model to automatically detect cells
  • Overcome challenges such as touching cells, structure shape and non-homogenous staining

Date: February 2025

Author: Georgia Golfis, PhD

Category: Tutorial

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